Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_01485Phage transcriptional regulator, ArpU family. (139 aa)    
Predicted Functional Partners:
D920_00095
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.761
D920_01712
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.761
D920_01729
Terminase small subunit; Psort location: Cytoplasmic, score: 7.50.
       0.713
D920_00083
Putative phage portal protein, SPP1 Gp6; KEGG: ame:408348 0.0015 putative rRNA methyltransferase 3-like; K14857 AdoMet-dependent rRNA methyltransferase SPB1; Psort location: Cytoplasmic, score: 7.50.
     
 0.692
D920_01731
Phage portal protein, SPP1 family; KEGG: pfd:PFDG_01390 0.0096 hypothetical protein; K01876 aspartyl-tRNA synthetase.
     
 0.692
D920_01730
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 7.50.
       0.672
D920_01484
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.658
D920_01486
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.648
D920_01487
Hypothetical protein.
       0.648
D920_00014
Site-specific recombinase, phage integrase family; KEGG: apb:SAR116_1016 7.9e-10 phage integrase; Psort location: Cytoplasmic, score: 7.50.
       0.557
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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