Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01491Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the HesB/IscA family. (120 aa)    
Predicted Functional Partners:
D920_01448
Bacterial transferase hexapeptide repeat protein; KEGG: efc:EFAU004_02193 4.2e-66 Carbonic anhydrase/acetyltransferase.
       0.991
D920_01449
ABC transporter, ATP-binding protein; KEGG: efi:OG1RF_12220 1.4e-255 mdlB2; multidrug ABC superfamily ATP binding cassette transporter, ABC protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.960
D920_01450
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4005 3.1e-182 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.951
D920_01010
Putative phosphoesterase; KEGG: efc:EFAU004_00152 2.4e-118 Calcineurin-like phosphoesterase; Psort location: Cytoplasmic, score: 7.50.
 
     0.884
D920_01012
Acetyltransferase, GNAT family; KEGG: thl:TEH_22190 1.7e-48 putative acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.865
D920_01021
Hypothetical protein; KEGG: stj:SALIVA_0644 5.4e-11 glgA; glycogen synthase; Psort location: Cytoplasmic, score: 7.50.
       0.865
D920_02436
Carboxypeptidase Taq metallopeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
       0.809
D920_03091
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efc:EFAU004_00525 2.5e-141 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.798
D920_01089
Acetyltransferase, GNAT family; KEGG: hhe:HH1444 9.5e-34 guaA; guanosine monophosphate synthetase GuaA K01951.
       0.782
msrB
methionine-R-sulfoxide reductase; KEGG: efu:HMPREF0351_10140 2.5e-61 msrB; peptide-methionine (R)-S-oxide reductase K07305; Psort location: Cytoplasmic, score: 7.50.
       0.767
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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