Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_01575Transporter, major facilitator family protein; KEGG: hse:Hsero_0990 4.0e-14 mmr; methylenomycin A resistance protein; Psort location: CytoplasmicMembrane, score: 10.00. (406 aa)    
Predicted Functional Partners:
D920_01576
Transcriptional regulator, PadR family; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.997
D920_00224
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.985
D920_02772
Universal stress family protein.
     
 0.965
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.931
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.926
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
     
 0.912
D920_02764
Hypothetical protein; KEGG: smz:SMD_1875 2.8e-05 carboxylesterase.
     
 0.912
D920_00822
KEGG: apb:SAR116_0757 4.6e-05 universal stress protein family protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.873
D920_02503
KEGG: apb:SAR116_0757 3.2e-06 universal stress protein family protein.
     
 0.873
D920_02005
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.862
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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