Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_01587Glyoxalase family protein; KEGG: efi:OG1RF_10397 4.0e-118 gloA2; lactoylglutathione lyase K15975; Psort location: Cytoplasmic, score: 7.50. (324 aa)    
Predicted Functional Partners:
D920_01588
Hypothetical protein; KEGG: bcz:pE33L466_0366 4.4e-16 phospholipase/carboxylesterase family protein K06999; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.998
D920_02358
Phospholipase/carboxylesterase; KEGG: efc:EFAU004_01254 5.6e-64 phospholipase/carboxylesterase K06999; Psort location: Cytoplasmic, score: 7.50.
  
 0.987
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.980
D920_00901
KEGG: efu:HMPREF0351_10204 0. aad; aldehyde-alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.962
D920_01579
Nitroreductase family protein; KEGG: efu:HMPREF0351_12619 1.3e-89 NADH dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.962
rph
tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
  
 
 0.944
D920_02357
Hypothetical protein; KEGG: efc:EFAU004_00863 3.5e-46 Flavin reductase-like domain protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.927
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.924
D920_02212
Glyoxalase family protein; KEGG: crn:CAR_c17130 1.3e-18 catE; catechol-2,3-dioxygenase subunit K07104; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.912
D920_02119
Von Willebrand factor type A domain protein; KEGG: hdn:Hden_3165 9.7e-07 cobalt chelatase subunit CobT K09883; Psort location: Cytoplasmic, score: 7.50.
     
 0.906
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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