Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_01599Transcriptional regulator, DeoR family; KEGG: apb:SAR116_0891 1.2e-24 glycerol-3-phosphate regulon repressor K02444; Psort location: Cytoplasmic, score: 7.50. (268 aa)    
Predicted Functional Partners:
D920_01600
KEGG: mps:MPTP_0366 1.0e-41 galactose-6-phosphate isomerase subunit LacA K01819; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.999
D920_01601
Sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: efa:EF1834 3.9e-63 lacB; galactose-6-phosphate isomerase subunit LacB K01819; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.998
D920_00947
PTS system mannose-specific EIIBCA component; KEGG: efu:HMPREF0351_11043 1.3e-222 manP; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02793 PTS system, mannose-specific IIA component; K02794 PTS system, mannose-specific IIB component K02795; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.996
D920_01985
PTS system fructose-specific EIIABC component; KEGG: efu:HMPREF0351_11611 4.1e-297 fruAB; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.996
D920_01603
KEGG: seq:SZO_15270 8.7e-75 tagatose-6-phosphate kinase; K00917 tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.995
lacD
Tagatose-bisphosphate aldolase; KEGG: efl:EF62_2178 5.4e-114 lacD_3; tagatose 1,6-diphosphate aldolase K01635.
 
   
 0.980
D920_01986
1-phosphofructokinase; KEGG: efu:HMPREF0351_11612 2.0e-130 fruK; 1-phosphofructokinase K00882; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.979
D920_01597
Putative PTS system, lactose-specific IIC component; KEGG: eat:EAT1b_1051 3.7e-202 PTS system lactose/cellobiose family transporter subunit IIC; K02787 PTS system, lactose-specific IIB component K02788; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.963
D920_01598
KEGG: lba:Lebu_0588 1.7e-30 PTS system, lactose-specific IIa component; K02786 PTS system, lactose-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
     
 0.958
D920_00901
KEGG: efu:HMPREF0351_10204 0. aad; aldehyde-alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.948
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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