Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_01624KEGG: crn:CAR_c23130 5.1e-102 alsE; D-allulose-6-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 7.50. (219 aa)    
Predicted Functional Partners:
D920_01626
Phosphotransferase system, EIIC; KEGG: crn:CAR_c23140 3.0e-159 fruA2; PTS system fructose-specific transporter subunit IIBC K02770; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.997
D920_01628
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: crn:CAR_c23160 3.7e-51 hypothetical protein; K02768 PTS system, fructose-specific IIA component; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.997
D920_01630
Hypothetical protein; KEGG: crn:CAR_c23180 2.7e-23 hypothetical protein; K02806 PTS system, nitrogen regulatory IIA component; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.997
D920_00947
PTS system mannose-specific EIIBCA component; KEGG: efu:HMPREF0351_11043 1.3e-222 manP; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02793 PTS system, mannose-specific IIA component; K02794 PTS system, mannose-specific IIB component K02795; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.994
D920_01985
PTS system fructose-specific EIIABC component; KEGG: efu:HMPREF0351_11611 4.1e-297 fruAB; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.994
tal
Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
 
 
 0.993
D920_01520
KEGG: efc:EFAU004_02618 2.5e-242 serine/threonine-protein kinase K08884; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.990
D920_01631
PRD domain protein; KEGG: crn:CAR_c23190 2.9e-147 manR; transcriptional regulator ManR K02538; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.990
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.989
D920_01623
Transketolase; KEGG: efc:EFAU004_01009 1.5e-274 tkt; transketolase K00615; Belongs to the transketolase family.
 
 
 0.989
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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