Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01632Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (313 aa)    
Predicted Functional Partners:
D920_01633
KEGG: llt:CVCAS_0477 8.5e-29 yfgE; ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
       0.987
D920_01634
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
       0.965
D920_01023
KEGG: llk:LLKF_0294 2.4e-72 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 9.51.
       0.855
coaA
Pantothenate kinase; KEGG: efu:HMPREF0351_10035 4.1e-148 coaA; pantothenate kinase K00867; Psort location: Cytoplasmic, score: 7.50.
       0.445
D920_01630
Hypothetical protein; KEGG: crn:CAR_c23180 2.7e-23 hypothetical protein; K02806 PTS system, nitrogen regulatory IIA component; Psort location: CytoplasmicMembrane, score: 9.55.
       0.439
D920_01631
PRD domain protein; KEGG: crn:CAR_c23190 2.9e-147 manR; transcriptional regulator ManR K02538; Psort location: Cytoplasmic, score: 7.50.
       0.439
D920_01629
KEGG: crn:CAR_c23170 4.8e-42 frwB2; fructose-like phosphotransferase enzyme IIB component 2 K02769; Psort location: Cytoplasmic, score: 9.97.
       0.431
D920_01627
KEGG: efi:OG1RF_11234 7.1e-41 frwB; PTS family fructose porter, IIB component; Psort location: Cytoplasmic, score: 9.97.
       0.410
D920_01628
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: crn:CAR_c23160 3.7e-51 hypothetical protein; K02768 PTS system, fructose-specific IIA component; Psort location: CytoplasmicMembrane, score: 8.78.
       0.410
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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