Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01641KEGG: efu:HMPREF0351_12652 6.0e-44 A24A family peptidase; K02236 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (189 aa)    
Predicted Functional Partners:
D920_00187
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 0.00015 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.998
D920_00186
KEGG: pfe:PSF113_0439 1.7e-32 xcpR; protein XcpR K02454; Psort location: Cytoplasmic, score: 9.89.
  
 
 0.997
D920_03126
Competence protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.997
D920_02858
KEGG: apb:SAR116_0616 9.3e-39 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.996
D920_01639
Ferritin-like protein; KEGG: efc:EFAU004_02816 3.9e-72 DNA protection during starvation protein 1 K04047; Psort location: Cytoplasmic, score: 9.97; Belongs to the Dps family.
     
 0.994
D920_01640
Putative gluconokinase; KEGG: efu:HMPREF0351_12651 1.1e-175 gntK; gluconokinase K00851; Psort location: Cytoplasmic, score: 9.97; Belongs to the FGGY kinase family.
       0.988
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.5e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
     
 0.986
D920_03129
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.986
D920_02819
Tetratricopeptide repeat protein; KEGG: bya:BANAU_2226 1.2e-52 ypiA; UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.985
D920_01456
KEGG: apb:SAR116_0666 2.3e-19 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0758 family.
     
 0.984
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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