Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01654ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 6.1e-122 ycjN; ABC transporter periplasmic binding protein ycjN K02027. (441 aa)    
Predicted Functional Partners:
D920_01653
ABC transporter, permease protein; KEGG: bsr:I33_2930 4.0e-31 L-arabinose transport system permease protein AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.997
D920_01652
ABC transporter, permease protein; KEGG: tex:Teth514_2199 1.1e-37 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.996
D920_03029
ABC transporter, ATP-binding protein; KEGG: efu:HMPREF0351_12250 1.9e-180 msmK; maltose ABC superfamily ATP binding cassette transporter, ABC protein K10112; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.995
D920_01655
Alpha amylase, catalytic domain protein; KEGG: efu:HMPREF0351_12663 7.1e-199 sucrose phosphorylase K00690; Psort location: Cytoplasmic, score: 9.95.
 
  
 0.992
D920_01650
AP endonuclease, family 2; KEGG: efu:HMPREF0351_12658 9.7e-115 sugar isomerase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.991
D920_01651
Oxidoreductase, zinc-binding dehydrogenase family protein; KEGG: efu:HMPREF0351_12659 8.3e-157 alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.989
D920_00424
Putative transmembrane permease MsmF; KEGG: apb:SAR116_1511 1.2e-38 binding-protein-dependent transport system inner membrane protein K02025; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.977
D920_00598
ABC transporter, permease protein; KEGG: bst:GYO_3124 1.1e-35 L-arabinose transport system permease AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.977
D920_02579
ABC transporter, permease protein; KEGG: bsr:I33_2930 2.1e-34 L-arabinose transport system permease protein AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.975
D920_02973
ABC transporter, permease protein; KEGG: bsr:I33_2930 1.1e-40 L-arabinose transport system permease protein AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.973
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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