Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01671LPXTG-motif protein cell wall anchor domain protein; KEGG: efu:HMPREF0351_10547 0.0021 fms12; LPXTG family cell surface protein Fms12; Psort location: Cellwall, score: 9.26. (126 aa)    
Predicted Functional Partners:
D920_01672
Hypothetical protein; KEGG: asd:AS9A_1014 0.0015 acyl-CoA dehydrogenase; K00257.
       0.773
D920_01673
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.668
D920_01670
Hypothetical protein; KEGG: rer:RER_03760 0.00078 dnaX; DNA polymerase III subunits gamma and tau K02343.
       0.664
D920_01669
Hypothetical protein.
       0.660
D920_01674
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.487
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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