Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01673Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (167 aa)    
Predicted Functional Partners:
D920_01672
Hypothetical protein; KEGG: asd:AS9A_1014 0.0015 acyl-CoA dehydrogenase; K00257.
       0.954
D920_02325
Hypothetical protein.
       0.870
D920_01670
Hypothetical protein; KEGG: rer:RER_03760 0.00078 dnaX; DNA polymerase III subunits gamma and tau K02343.
       0.812
D920_01669
Hypothetical protein.
       0.811
D920_02326
Hypothetical protein.
       0.698
D920_02328
Leucine Rich repeat-containing domain protein; KEGG: tva:TVAG_387410 4.6e-06 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: CytoplasmicMembrane, score: 9.93.
       0.698
D920_01671
LPXTG-motif protein cell wall anchor domain protein; KEGG: efu:HMPREF0351_10547 0.0021 fms12; LPXTG family cell surface protein Fms12; Psort location: Cellwall, score: 9.26.
       0.668
D920_01985
PTS system fructose-specific EIIABC component; KEGG: efu:HMPREF0351_11611 4.1e-297 fruAB; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
       0.657
D920_01986
1-phosphofructokinase; KEGG: efu:HMPREF0351_11612 2.0e-130 fruK; 1-phosphofructokinase K00882; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
       0.643
D920_01987
Transcriptional regulator, DeoR family; KEGG: hiq:CGSHiGG_07025 6.4e-24 fucI; L-fucose isomerase K02430.
       0.643
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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