Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_01737Hypothetical protein; KEGG: edi:EDI_341030 2.6e-05 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50. (211 aa)    
Predicted Functional Partners:
D920_01738
Hypothetical protein.
     
 0.995
D920_01740
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.993
D920_01729
Terminase small subunit; Psort location: Cytoplasmic, score: 7.50.
 
    0.987
D920_01730
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 7.50.
 
    0.986
D920_01744
Phage major tail protein, TP901-1 family; Psort location: Cytoplasmic, score: 7.50.
  
    0.982
D920_01731
Phage portal protein, SPP1 family; KEGG: pfd:PFDG_01390 0.0096 hypothetical protein; K01876 aspartyl-tRNA synthetase.
 
    0.981
D920_01742
Phage protein, HK97 gp10 family.
       0.975
D920_01734
KEGG: pfa:PFL1925w 0.0037 cell division protein FtsH, putative K01417; Psort location: Cytoplasmic, score: 7.50.
 
     0.973
D920_00145
Phage protein, HK97 gp10 family; Psort location: Cytoplasmic, score: 7.50.
       0.953
D920_00217
Peptidase, M23 family; KEGG: efu:HMPREF0351_12843 1.6e-185 lysozyme; Psort location: CytoplasmicMembrane, score: 9.55.
       0.938
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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