Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01778Hypothetical protein. (121 aa)    
Predicted Functional Partners:
D920_02993
Putative neutral zinc metallopeptidase; KEGG: efc:EFAU004_02238 6.5e-102 Zn-dependent protease K06973; Psort location: CytoplasmicMembrane, score: 10.00.
       0.991
D920_01780
Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 3.4e-18 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.980
D920_02990
Hypothetical protein.
       0.980
D920_01779
ABC transporter, ATP-binding protein; KEGG: efu:HMPREF0351_10446 1.7e-108 ABC superfamily ATP binding cassette transporter, ABC protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.975
D920_01907
Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 4.6e-22 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.930
D920_01403
ABC transporter, ATP-binding protein; KEGG: efi:OG1RF_12114 1.6e-91 ABC superfamily ATP binding cassette transporter, ABC protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.898
D920_01906
ABC transporter, ATP-binding protein; KEGG: efu:HMPREF0351_10446 1.4e-120 ABC superfamily ATP binding cassette transporter, ABC protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.898
D920_00463
Putative glycerol phosphate lipoteichoic acid synthase 1; KEGG: efu:HMPREF0351_10639 0. phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase; Psort location: CytoplasmicMembrane, score: 9.35.
       0.893
D920_01402
Hypothetical protein; KEGG: efu:HMPREF0351_10749 1.2e-180 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.878
D920_01770
KEGG: efc:EFAU004_00424 0. ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.867
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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