Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_01812Carbohydrate binding domain protein; KEGG: cro:ROD_44831 8.0e-72 polysaccharide degrading enzyme; K01183 chitinase; Belongs to the glycosyl hydrolase 18 family. (438 aa)    
Predicted Functional Partners:
D920_00472
Putative chitinase C1; KEGG: pfl:PFL_2091 2.4e-111 chiC; chitinase K01183; Psort location: Extracellular, score: 9.73; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.994
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
 
 
 0.951
D920_02607
KEGG: cbn:CbC4_5030 1.1e-39 phosphatidylinositol-specific phospholipase C, X domain containing protein; K01771 1-phosphatidylinositol phosphodiesterase; Psort location: Extracellular, score: 9.73.
 
 
 
 0.946
D920_00470
KEGG: bya:BANAU_1879 1.7e-62 yucG; chitin-binding protein K03933.
 
   
 0.933
D920_02913
Carbohydrate binding domain protein; KEGG: lmy:LM5923_2862 3.0e-175 hypothetical protein; K01183 chitinase.
 
 
 
0.920
D920_01813
Hypothetical protein; KEGG: bcz:pE33L466_0140 0.0031 enhancin family protein K01417.
 
 
 
 0.902
D920_00241
Hypothetical protein.
   
 
 0.888
D920_02701
Hypothetical protein.
   
 
 0.888
smc
Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.876
D920_02012
Rhodanese-like protein; KEGG: fna:OOM_1444 2.4e-40 rhodanese sulfurtransferase K07146; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0176 family.
       0.830
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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