Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01863Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (147 aa)    
Predicted Functional Partners:
D920_01593
Copper-exporting ATPase; KEGG: efa:EF0298 0. copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.981
D920_01288
Cation diffusion facilitator family transporter; KEGG: eci:UTI89_C0749 4.5e-39 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.918
D920_02075
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.912
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.903
D920_02312
Glutaredoxin; KEGG: llk:LLKF_1006 6.3e-17 ndrH; ribonucleoside reductase, glutaredoxin subunit K06191.
       0.902
D920_02796
Putative virulence factor B; KEGG: mai:MICA_2002 3.4e-11 3-deoxy-7-phosphoheptulonate synthase K00243; Psort location: Cytoplasmic, score: 7.50; Belongs to the CvfB family.
       0.899
argS
arginine--tRNA ligase; KEGG: efu:HMPREF0351_11691 3.5e-277 argS; arginine--tRNA ligase K01887; Psort location: Cytoplasmic, score: 9.97.
       0.898
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
       0.890
D920_02702
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.890
D920_01592
Heavy metal-associated domain protein; KEGG: sif:Sinf_0238 8.4e-06 Copper chaperone.
  
  
 0.876
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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