Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_01873GIY-YIG catalytic domain protein; KEGG: cnc:CNE_2c01410 6.7e-13 cho1; excinuclease Cho K07461. (97 aa)    
Predicted Functional Partners:
D920_01872
Methyltransferase small domain protein; KEGG: efu:HMPREF0351_12430 1.2e-98 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.999
D920_01857
Acyltransferase; KEGG: efc:EFAU004_02490 1.1e-92 acyltransferase K00655.
  
  
 0.993
rsmI
S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.991
D920_02695
Acetyltransferase, GNAT family; KEGG: bce:BC2691 8.2e-15 acetyltransferase.
 
     0.991
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
       0.980
D920_01408
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
    0.975
D920_02535
comEA protein; KEGG: has:Halsa_0780 3.1e-08 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 0.975
D920_02532
Metallo-beta-lactamase domain protein; KEGG: zga:zobellia_1566 0.0040 metallohydrolase; Psort location: Cytoplasmic, score: 7.50.
 
     0.972
D920_02533
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.0e-06 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
       0.969
rpsB
Ribosomal protein S2; KEGG: apb:SAR116_0519 5.2e-61 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family.
       0.967
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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