Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01943LPXTG-motif protein cell wall anchor domain protein; KEGG: mmx:MmarC6_0756 0.00061 cobN; cobaltochelatase subunit CobN K02230; Psort location: Cellwall, score: 8.71. (1096 aa)    
Predicted Functional Partners:
D920_00437
Sortase family protein; KEGG: mps:MPTP_0053 1.3e-62 sortase A, LPXTG specific; K07284 sortase A.
     
 0.945
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
  
  
 0.909
D920_02592
Sortase family protein; KEGG: efa:EF1094 5.3e-75 sortase; K07284 sortase A; Psort location: CytoplasmicMembrane, score: 9.87.
     
 0.907
D920_00233
Sortase, SrtB family; KEGG: cle:Clole_4031 7.9e-26 peptidase C60 sortase A and B; K08600 sortase B; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.899
D920_00510
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.863
D920_01931
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 0.00021 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 0.825
D920_01130
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 7.9e-07 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 0.823
D920_00512
CHAP domain protein.
 
   
 0.822
D920_00502
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 3.1e-06 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.96.
 
   
 0.819
D920_01132
Sortase family protein; KEGG: mcl:MCCL_plsB0018 2.2e-30 hypothetical protein; K07284 sortase A.
     
 0.800
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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