Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
D920_02001Hypothetical protein. (351 aa)    
Predicted Functional Partners:
D920_00381
Hypothetical protein; KEGG: efi:OG1RF_12452 1.2e-22 ubiD; UbiD family decarboxylase.
 
  
 0.966
D920_00974
Hypothetical protein; KEGG: efi:OG1RF_12452 6.4e-24 ubiD; UbiD family decarboxylase.
 
  
 0.938
D920_02000
Hypothetical protein.
 
     0.936
D920_00850
Hypothetical protein; KEGG: efi:OG1RF_12452 4.3e-25 ubiD; UbiD family decarboxylase.
 
  
 0.935
D920_00318
Hypothetical protein; KEGG: efi:OG1RF_12454 3.1e-31 ubiD2; UbiD family decarboxylase; Psort location: Extracellular, score: 9.13.
 
  
 0.928
D920_00319
Hypothetical protein; KEGG: efi:OG1RF_12452 9.3e-23 ubiD; UbiD family decarboxylase.
 
   
 0.924
D920_02003
Legume lectins beta domain protein.
 
   
 0.923
D920_00838
Hypothetical protein; KEGG: efi:OG1RF_12454 7.2e-12 ubiD2; UbiD family decarboxylase.
 
  
 0.915
D920_00839
Hypothetical protein; KEGG: efi:OG1RF_12452 9.2e-16 ubiD; UbiD family decarboxylase.
 
  
 0.913
D920_00236
Hypothetical protein; KEGG: efi:OG1RF_12452 2.5e-13 ubiD; UbiD family decarboxylase.
 
     0.905
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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