Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02008Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (127 aa)    
Predicted Functional Partners:
D920_02010
Glyoxalase family protein; KEGG: efu:HMPREF0351_11571 6.1e-42 gloA; lactoylglutathione lyase; Psort location: Cytoplasmic, score: 7.50.
       0.993
D920_02007
HAD hydrolase, family IA, variant 3; KEGG: efc:EFAU004_01563 2.9e-60 phosphoglycolate phosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.992
D920_02536
PDZ domain protein; KEGG: scp:HMPREF0833_10040 2.5e-84 PDZ domain-containing protein K07177.
       0.991
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.991
D920_02538
KEGG: efc:EFAU004_01080 7.2e-71 RsmD family RNA methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.991
D920_02540
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0342 family.
 
     0.988
D920_02014
Tex-like protein; KEGG: bur:Bcep18194_A5099 3.1e-166 RNA binding S1 K06959; Psort location: Cytoplasmic, score: 9.97.
       0.987
D920_02013
KEGG: efu:HMPREF0351_11569 3.9e-111 pphA; phosphoprotein phosphatase K07313; Psort location: Cytoplasmic, score: 7.50.
       0.986
D920_02539
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.985
D920_00947
PTS system mannose-specific EIIBCA component; KEGG: efu:HMPREF0351_11043 1.3e-222 manP; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02793 PTS system, mannose-specific IIA component; K02794 PTS system, mannose-specific IIB component K02795; Psort location: CytoplasmicMembrane, score: 10.00.
       0.982
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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