Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02013KEGG: efu:HMPREF0351_11569 3.9e-111 pphA; phosphoprotein phosphatase K07313; Psort location: Cytoplasmic, score: 7.50. (245 aa)    
Predicted Functional Partners:
D920_02014
Tex-like protein; KEGG: bur:Bcep18194_A5099 3.1e-166 RNA binding S1 K06959; Psort location: Cytoplasmic, score: 9.97.
     
 0.996
D920_02015
KEGG: efi:OG1RF_11084 1.0e-46 SprT family protein K03095; Psort location: Cytoplasmic, score: 7.50.
 
     0.996
D920_02010
Glyoxalase family protein; KEGG: efu:HMPREF0351_11571 6.1e-42 gloA; lactoylglutathione lyase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.995
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
    0.993
D920_02008
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.986
D920_01370
Geranyltranstransferase; KEGG: efu:HMPREF0351_10781 3.6e-101 ispA; geranyltranstransferase K13789; Psort location: Cytoplasmic, score: 9.95; Belongs to the FPP/GGPP synthase family.
  
  
 0.982
D920_01367
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
     
 0.978
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.5e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
  
    0.978
D920_02009
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; KEGG: ctu:CTU_37370 4.0e-31 gltP; glutamate/aspartate:proton symporter K11102; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.977
D920_02018
Hypothetical protein; KEGG: apb:SAR116_1414 4.8e-26 integral membrane protein K06890; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the BI1 family.
       0.968
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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