STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02027Hypothetical protein. (114 aa)    
Predicted Functional Partners:
D920_02026
Hypothetical protein.
      
0.608
D920_02024
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: efu:HMPREF0351_11557 5.4e-153 dnaB2; replicative DNA helicase DnaB K03346.
       0.554
D920_02025
Primosomal protein DnaI; Psort location: CytoplasmicMembrane, score: 8.16.
       0.554
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
       0.537
D920_02028
Hypothetical protein.
      
0.470
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.