Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_02048Hypothetical protein. (82 aa)    
Predicted Functional Partners:
D920_02047
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.944
D920_02049
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.705
D920_02046
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.581
D920_02045
DNA-binding helix-turn-helix protein; KEGG: sgg:SGGBAA2069_c10720 0.0057 transcriptional regulator.
       0.559
D920_02050
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.520
D920_02051
KEGG: apb:SAR116_0035 4.7e-51 ammonium transporter K03320; Psort location: CytoplasmicMembrane, score: 10.00.
       0.520
D920_02052
Extreme acid sensitivity protein XasA; KEGG: sds:SDEG_0016 2.3e-08 amino acid permease K03294; Psort location: CytoplasmicMembrane, score: 10.00.
       0.495
D920_02044
DNA-binding helix-turn-helix protein; KEGG: clj:CLJU_c36670 7.4e-10 transcriptional regulator; K01356 repressor LexA.
       0.459
D920_02053
Glutaminase; KEGG: efc:EFAU004_00858 6.9e-98 glutaminase K01425; Belongs to the glutaminase family.
       0.457
D920_02043
Putative toxin-antitoxin system, toxin component; Psort location: Cytoplasmic, score: 7.50.
       0.448
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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