Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02052Extreme acid sensitivity protein XasA; KEGG: sds:SDEG_0016 2.3e-08 amino acid permease K03294; Psort location: CytoplasmicMembrane, score: 10.00. (475 aa)    
Predicted Functional Partners:
D920_00474
Na+/H+ antiporter NhaC; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.990
D920_02053
Glutaminase; KEGG: efc:EFAU004_00858 6.9e-98 glutaminase K01425; Belongs to the glutaminase family.
 
  
 0.971
D920_02659
Carbamate kinase; KEGG: ehr:EHR_10230 1.5e-150 putative amino acid kinase; Psort location: Cytoplasmic, score: 7.50; Belongs to the carbamate kinase family.
  
  
 0.965
D920_00901
KEGG: efu:HMPREF0351_10204 0. aad; aldehyde-alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.962
D920_02660
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
  
 0.961
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.953
arcA
Arginine deiminase; KEGG: efc:EFAU004_01736 7.9e-200 arcA; arginine deiminase K01478; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.918
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
    
 0.906
D920_02051
KEGG: apb:SAR116_0035 4.7e-51 ammonium transporter K03320; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.906
D920_01988
Chloride transporter, ClC family; KEGG: ssr:SALIVB_1179 3.8e-113 ribonuclease HII; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.900
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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