Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02164KEGG: hor:Hore_13150 3.4e-25 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.67. (353 aa)    
Predicted Functional Partners:
D920_02163
KEGG: efc:EFAU004_02559 8.9e-279 alpha-1,2-mannosidase; Psort location: Cytoplasmic, score: 7.50.
 
     0.998
D920_02166
KEGG: efc:EFAU004_02556 0. glycosyl hydrolase family 38 protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.995
D920_02167
Putative fructokinase; KEGG: efu:HMPREF0351_12497 4.3e-128 cscK3; fructokinase K00847; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.995
D920_02165
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.970
D920_01271
Phosphocarrier protein HPr; KEGG: efc:EFAU004_01332 5.7e-39 ptsH; phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 10.00.
   
 
 0.960
D920_01164
KEGG: efu:HMPREF0351_11028 3.2e-100 araD; L-ribulose-5-phosphate 4-epimerase K01786; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.951
D920_00947
PTS system mannose-specific EIIBCA component; KEGG: efu:HMPREF0351_11043 1.3e-222 manP; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02793 PTS system, mannose-specific IIA component; K02794 PTS system, mannose-specific IIB component K02795; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.950
D920_01985
PTS system fructose-specific EIIABC component; KEGG: efu:HMPREF0351_11611 4.1e-297 fruAB; PTS system fructose/mannitol (fru) transporter subunit IIABC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.950
D920_00428
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.945
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.935
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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