Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02174Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (138 aa)    
Predicted Functional Partners:
D920_02175
Pectinesterase; KEGG: efc:EFAU004_02536 2.8e-94 pectinesterase K01051; Psort location: Cytoplasmic, score: 7.50.
       0.983
D920_02176
Hypothetical protein; KEGG: efc:EFAU004_02537 4.6e-108 alpha/beta hydrolase family protein; Psort location: Cytoplasmic, score: 7.50.
       0.977
D920_02178
Glycosyl hydrolase, family 88; KEGG: efu:HMPREF0351_12481 7.2e-174 glycosyl hydrolase; K15532 unsaturated rhamnogalacturonyl hydrolase; Psort location: Cytoplasmic, score: 9.67.
       0.954
D920_02177
Polygalacturonase; KEGG: efu:HMPREF0351_12480 2.4e-198 pectin lyase; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycosyl hydrolase 28 family.
       0.949
D920_02173
KEGG: efc:EFAU004_02534 4.3e-208 glycosyl hydrolase family protein K01198; Belongs to the glycosyl hydrolase 43 family.
       0.939
D920_00551
Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ebe:B21_01131 5.3e-36 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.
       0.888
D920_00553
KEGG: ebe:B21_01129 5.2e-61 potD; potD, subunit of putrescine/spermidine ABC transporter K11069; Psort location: CytoplasmicMembrane, score: 9.55.
       0.888
D920_00552
Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: gwc:GWCH70_0325 4.6e-92 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
       0.879
D920_02909
Cupin domain protein; KEGG: bst:GYO_2934 5.4e-34 pcaC; 4-carboxymuconolactone decarboxylase; Psort location: Cytoplasmic, score: 7.50.
       0.849
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
       0.847
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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