Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02178Glycosyl hydrolase, family 88; KEGG: efu:HMPREF0351_12481 7.2e-174 glycosyl hydrolase; K15532 unsaturated rhamnogalacturonyl hydrolase; Psort location: Cytoplasmic, score: 9.67. (379 aa)    
Predicted Functional Partners:
D920_02175
Pectinesterase; KEGG: efc:EFAU004_02536 2.8e-94 pectinesterase K01051; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.999
D920_02177
Polygalacturonase; KEGG: efu:HMPREF0351_12480 2.4e-198 pectin lyase; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycosyl hydrolase 28 family.
   
 0.999
D920_02176
Hypothetical protein; KEGG: efc:EFAU004_02537 4.6e-108 alpha/beta hydrolase family protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.997
D920_02180
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.991
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.989
D920_01165
Polygalacturonase; KEGG: efc:EFAU004_02532 1.9e-150 polygalacturonase; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycosyl hydrolase 28 family.
   
 0.989
D920_02173
KEGG: efc:EFAU004_02534 4.3e-208 glycosyl hydrolase family protein K01198; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.986
D920_02179
ABC transporter, solute-binding protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.983
D920_02186
SAF domain protein; KEGG: efu:HMPREF0351_12489 9.9e-225 uxaA; altronate dehydratase K01685; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.975
uxaC
Glucuronate isomerase; KEGG: efu:HMPREF0351_12490 8.0e-207 uxaC; glucuronate isomerase K01812; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.964
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.