Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02183Transcriptional regulator, AraC family; KEGG: ppo:PPM_0752 1.2e-18 yesN7; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: Cytoplasmic, score: 9.97. (732 aa)    
Predicted Functional Partners:
D920_00901
KEGG: efu:HMPREF0351_10204 0. aad; aldehyde-alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.952
D920_02683
Periplasmic binding protein; KEGG: bao:BAMF_3696 1.1e-19 RBAM_035840; iron compound ABC transporter substrate-binding protein FeuA K02016; Psort location: CytoplasmicMembrane, score: 9.68.
 
  
 0.946
D920_02179
ABC transporter, solute-binding protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.942
D920_02190
Rhamnogalacturonan acetylesterase RhgT family protein; KEGG: efc:EFAU004_02549 8.6e-52 GDSL-like Lipase/Acylhydrolase.
 
  
 0.939
D920_02178
Glycosyl hydrolase, family 88; KEGG: efu:HMPREF0351_12481 7.2e-174 glycosyl hydrolase; K15532 unsaturated rhamnogalacturonyl hydrolase; Psort location: Cytoplasmic, score: 9.67.
 
  
 0.934
D920_02681
Putative iron(3+)-hydroxamate import system permease protein FhuB; KEGG: bst:GYO_3640 4.9e-65 ferrichrome transport system permease FhuB K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.933
D920_02680
KEGG: bst:GYO_3639 2.2e-60 ferrichrome transport system permease FhuG K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.930
rhaA
L-rhamnose isomerase; KEGG: efu:HMPREF0351_10213 4.2e-201 rhaA; L-rhamnose isomerase K01813; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.922
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.916
D920_02127
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.904
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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