Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02199Putative bactoprenol glucosyl transferase-like protein; KEGG: efu:HMPREF0351_10563 4.6e-140 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Psort location: CytoplasmicMembrane, score: 9.99. (311 aa)    
Predicted Functional Partners:
D920_01295
Response regulator protein VraR; KEGG: npu:Npun_R2420 5.4e-43 LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
     
 0.994
D920_01292
KEGG: suq:HMPREF0772_12145 9.3e-55 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.993
D920_01296
Putative sensor protein VraS; KEGG: efc:EFAU004_01356 2.3e-154 sensor histidine kinase K11617; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.992
D920_01291
HesB-like protein; KEGG: ipo:Ilyop_0246 0.0047 ADP-glyceromanno-heptose 6-epimerase K03274; Psort location: Cytoplasmic, score: 7.50.
       0.991
D920_01297
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.991
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.991
D920_01314
ABC transporter, ATP-binding protein; KEGG: efu:HMPREF0351_10903 9.0e-199 tagH; teichoic acid ABC superfamily ATP binding cassette transporter, ABC protein K09691; Psort location: CytoplasmicMembrane, score: 9.51.
 
  
 0.990
D920_01287
Cell wall teichoic acid glycosylation protein GtcA family protein; KEGG: nmr:Nmar_0062 0.00028 glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.988
D920_01315
ABC-2 type transporter; KEGG: apb:SAR116_1880 0.0045 multidrug ABC transporter K09686; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.988
D920_00817
Bacterial membrane protein YfhO; KEGG: bcc:BCc_109 0.00012 nuoN; NADH dehydrogenase I chain N K00343; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.986
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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