Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_02202Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (239 aa)    
Predicted Functional Partners:
D920_01185
Hypothetical protein; KEGG: pfe:PSF113_4044 0.00018 glyoxalase bleomycin resistance protein dioxygenase K04750; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.976
D920_00956
Chorismate mutase; KEGG: efc:EFAU004_00196 1.2e-100 maltose O-acetyltransferase K00661; Psort location: Cytoplasmic, score: 9.67.
 
     0.943
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
       0.922
D920_00378
Transcriptional regulator, effector binding domain protein; KEGG: pjd:Pjdr2_5363 1.6e-09 AraC family transcriptional regulator K13530; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.914
D920_00762
Flavoprotein family protein; KEGG: bao:BAMF_2804 1.0e-110 ytfP; NAD(FAD) dehydrogenase K07007.
  
    0.909
D920_00351
Hypothetical protein.
     
 0.905
D920_02352
Hypothetical protein; Belongs to the UPF0145 family.
     
 0.905
D920_00358
S4 domain protein YaaA.
       0.904
D920_00473
KEGG: pfr:PFREUD_16470 5.3e-36 ubiG; 3-demethylubiquinone-9 3-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.904
D920_00456
Transcriptional regulator, effector binding domain protein.
     
 0.902
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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