Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02294KEGG: efu:HMPREF0351_10633 3.9e-56 ntd; nucleoside deoxyribosyltransferase. (146 aa)    
Predicted Functional Partners:
D920_02293
TIGR00730 family protein; KEGG: efu:HMPREF0351_10632 3.0e-81 cadA; lysine decarboxylase K06966; Psort location: Cytoplasmic, score: 7.50; Belongs to the LOG family.
       0.995
D920_00459
Deoxyguanosine kinase; KEGG: efu:HMPREF0351_10634 1.2e-100 dukA2; deoxyguanosine kinase.
     
 0.990
D920_02778
KEGG: efu:HMPREF0351_11071 6.6e-164 hydroxymethylglutaryl-CoA synthase K01641; Psort location: Cytoplasmic, score: 7.50.
       0.918
D920_02766
Inosine-uridine preferring nucleoside hydrolase; KEGG: efu:HMPREF0351_12060 3.3e-130 rihB; purine nucleosidase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.910
D920_00637
Deoxynucleoside kinase; KEGG: lsn:LSA_11540 1.0e-46 Deoxyguanosine kinase; Psort location: CytoplasmicMembrane, score: 8.16.
     
 0.882
D920_00874
Deoxyguanosine kinase; KEGG: efu:HMPREF0351_10226 2.1e-87 deoxynucleoside kinase; Psort location: Cytoplasmic, score: 7.50.
     
 0.882
rpsU
Ribosomal protein S21; KEGG: sew:SeSA_A3399 3.0e-10 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bS21 family.
       0.843
D920_01333
Hypothetical protein; KEGG: efu:HMPREF0351_10817 1.3e-126 GNAT family acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.843
D920_01369
Ribosomal RNA large subunit methyltransferase J; KEGG: efc:EFAU004_00756 3.4e-112 hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.843
D920_00814
KEGG: ctc:CTC01841 3.0e-56 PTS system, fructose-specific IIBC component K07035; Psort location: CytoplasmicMembrane, score: 10.00.
       0.840
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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