Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02295NAD dependent epimerase/dehydratase family protein; KEGG: efu:HMPREF0351_12357 1.5e-72 flavin reductase K07118. (228 aa)    
Predicted Functional Partners:
D920_01166
KEGG: efc:EFAU004_02419 1.8e-83 CAAX amino terminal protease K07052; Psort location: CytoplasmicMembrane, score: 10.00.
       0.991
groS
Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
       0.978
D920_02490
KEGG: efc:EFAU004_01046 1.0e-80 nitroreductase family protein K07078; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.971
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.970
D920_02884
KEGG: apb:SAR116_0013 9.3e-07 BadM/Rrf2 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.964
D920_00801
Glyoxal reductase; KEGG: efi:OG1RF_10362 6.4e-111 morA; aldo/keto reductase family protein; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.944
D920_01846
Hypothetical protein; KEGG: efu:HMPREF0351_12419 1.3e-78 dithiol-disulfide isomerase; Psort location: Cytoplasmic, score: 7.50.
  
    0.944
D920_02212
Glyoxalase family protein; KEGG: crn:CAR_c17130 1.3e-18 catE; catechol-2,3-dioxygenase subunit K07104; Psort location: Cytoplasmic, score: 7.50.
     
 0.944
D920_02784
Glyoxal reductase; KEGG: efc:EFAU004_01236 3.7e-138 oxidoreductase, aldo/keto reductase family protein; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.944
D920_02908
KEGG: lbr:LVIS_1969 6.4e-47 gamma-carboxymuconolactone decarboxylase subunit-like protein; K01607 4-carboxymuconolactone decarboxylase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.936
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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