Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
D920_02344Hypothetical protein; KEGG: phu:Phum_PHUM547410 7.7e-05 papilin, putative; Psort location: Cellwall, score: 9.20. (951 aa)    
Predicted Functional Partners:
D920_00319
Hypothetical protein; KEGG: efi:OG1RF_12452 9.3e-23 ubiD; UbiD family decarboxylase.
 
  
 0.949
D920_02340
Hypothetical protein.
 
     0.913
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
  
  
 0.909
D920_02342
Hypothetical protein.
       0.875
D920_00249
Hypothetical protein; KEGG: lhl:LBHH_1000 0.0014 Cell envelope-associated proteinase; K01361 lactocepin.
 
   
 0.853
D920_00238
Hypothetical protein; KEGG: sud:ST398NM01_1060 4.6e-08 Chitinase.
 
   
 0.838
D920_00071
Hypothetical protein.
 
  
 0.830
D920_02341
Hypothetical protein.
       0.821
D920_00248
Hypothetical protein.
 
     0.812
D920_00233
Sortase, SrtB family; KEGG: cle:Clole_4031 7.9e-26 peptidase C60 sortase A and B; K08600 sortase B; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.798
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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