Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02496Hypothetical protein. (123 aa)    
Predicted Functional Partners:
D920_02498
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.934
D920_00773
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.918
D920_01510
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.899
D920_00772
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.888
D920_00774
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 7.50.
     
 0.876
D920_01453
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.876
D920_01770
KEGG: efc:EFAU004_00424 0. ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.863
D920_01402
Hypothetical protein; KEGG: efu:HMPREF0351_10749 1.2e-180 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.862
D920_01511
KEGG: efc:EFAU004_02612 2.0e-258 oligoendopeptidase, PepF/M3 family; Psort location: Cytoplasmic, score: 9.97.
 
     0.827
D920_01907
Efflux ABC transporter, permease protein; KEGG: efu:HMPREF0351_10749 4.6e-22 ABC superfamily ATP binding cassette transporter, membrane protein K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.806
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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