Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02508Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (117 aa)    
Predicted Functional Partners:
D920_00129
Hypothetical protein.
     
 0.993
D920_01580
KEGG: pfe:PSF113_1990 7.3e-07 MarR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
     0.970
D920_00918
Phage infection protein; KEGG: edi:EDI_048910 2.3e-14 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 10.00.
       0.966
D920_01579
Nitroreductase family protein; KEGG: efu:HMPREF0351_12619 1.3e-89 NADH dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.949
D920_01578
KEGG: bmq:BMQ_3032 4.2e-11 putative Antibiotic biosynthesis monooxygenase.
       0.939
D920_02384
Peptidase propeptide and YPEB domain protein; KEGG: ljf:FI9785_1075 2.0e-05 two-component system sensor histidine kinase.
  
  
 0.882
D920_02466
KEGG: efc:EFAU004_01021 3.7e-122 x-Pro dipeptidyl-peptidase K06889; Psort location: CytoplasmicMembrane, score: 9.55.
       0.855
D920_02854
LPXTG-motif protein cell wall anchor domain protein; KEGG: efc:EFAU004_01021 2.9e-29 x-Pro dipeptidyl-peptidase K06889; Psort location: Cellwall, score: 9.98.
       0.855
D920_00691
Hypothetical protein; KEGG: edi:EDI_048910 4.0e-12 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
       0.841
D920_00805
KEGG: nms:NMBM01240355_1487 0.0029 antibiotic biosynthesis monooxygenase family protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.833
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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