Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02541Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87. (381 aa)    
Predicted Functional Partners:
D920_02540
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0342 family.
 
     0.998
D920_02539
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.997
D920_02542
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
       0.997
D920_02543
Stage V sporulation protein E family protein; KEGG: hip:CGSHiEE_06365 1.0e-41 murG; N-acetylglucosaminyl transferase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
       0.997
D920_02544
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0358 family.
 
     0.997
D920_02536
PDZ domain protein; KEGG: scp:HMPREF0833_10040 2.5e-84 PDZ domain-containing protein K07177.
       0.995
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.995
D920_02538
KEGG: efc:EFAU004_01080 7.2e-71 RsmD family RNA methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.995
rph
tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
   
 
 0.987
D920_02008
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.978
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.