Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02544Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0358 family. (100 aa)    
Predicted Functional Partners:
D920_02540
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0342 family.
 
     0.998
D920_02541
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
 
     0.997
D920_02539
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.995
D920_02542
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.995
D920_02543
Stage V sporulation protein E family protein; KEGG: hip:CGSHiEE_06365 1.0e-41 murG; N-acetylglucosaminyl transferase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
     
 0.995
D920_02538
KEGG: efc:EFAU004_01080 7.2e-71 RsmD family RNA methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.992
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.991
D920_02536
PDZ domain protein; KEGG: scp:HMPREF0833_10040 2.5e-84 PDZ domain-containing protein K07177.
       0.988
D920_02546
GTP-binding protein TypA; KEGG: efu:HMPREF0351_11231 0. tufA3; elongation factor EF1A K06207; Psort location: CytoplasmicMembrane, score: 8.78.
       0.986
D920_02053
Glutaminase; KEGG: efc:EFAU004_00858 6.9e-98 glutaminase K01425; Belongs to the glutaminase family.
       0.960
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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