Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02581ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 7.6e-06 ycjN; ABC transporter periplasmic binding protein ycjN K02027; Psort location: Cytoplasmic, score: 7.50. (437 aa)    
Predicted Functional Partners:
D920_02578
ABC transporter, permease protein; KEGG: bcv:Bcav_3574 6.8e-43 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.999
D920_02579
ABC transporter, permease protein; KEGG: bsr:I33_2930 2.1e-34 L-arabinose transport system permease protein AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.998
D920_03029
ABC transporter, ATP-binding protein; KEGG: efu:HMPREF0351_12250 1.9e-180 msmK; maltose ABC superfamily ATP binding cassette transporter, ABC protein K10112; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.992
D920_02182
Protein LplC; KEGG: bsr:I33_2929 1.5e-29 L-arabinose transport system permease protein AraQ K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.983
D920_00598
ABC transporter, permease protein; KEGG: bst:GYO_3124 1.1e-35 L-arabinose transport system permease AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.982
D920_02576
Oxidoreductase, NAD-binding domain protein; KEGG: efc:EFAU004_01120 1.7e-179 oxidoreductase family, NAD-binding Rossmann fold protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.979
D920_00599
ABC transporter, permease protein; KEGG: tex:Teth514_2199 3.9e-56 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.975
D920_00424
Putative transmembrane permease MsmF; KEGG: apb:SAR116_1511 1.2e-38 binding-protein-dependent transport system inner membrane protein K02025; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.972
D920_02973
ABC transporter, permease protein; KEGG: bsr:I33_2930 1.1e-40 L-arabinose transport system permease protein AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.971
D920_02974
ABC transporter, permease protein; KEGG: dth:DICTH_0382 1.4e-44 L-arabinose transport system permease AraQ; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.971
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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