Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02587Oxidoreductase, NAD-binding domain protein; KEGG: efc:EFAU004_01129 9.4e-133 oxidoreductase family, NAD-binding Rossmann fold protein; Psort location: Cytoplasmic, score: 7.50. (321 aa)    
Predicted Functional Partners:
D920_02586
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.995
D920_02588
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.991
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.976
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
     
 0.976
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
     
 0.947
D920_02583
Hypothetical protein; KEGG: efu:HMPREF0351_11193 9.8e-99 dihydrodipicolinate synthase/N-acetylneuraminate lyase.
  
  
 0.946
D920_00582
NAD dependent epimerase/dehydratase family protein; KEGG: sud:ST398NM01_0168 4.4e-119 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.942
D920_02574
Xanthine permease; KEGG: apb:SAR116_1372 3.1e-70 xanthine/uracil permease K03458; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.934
udk
Uridine kinase; KEGG: ehr:EHR_03945 2.7e-103 uridine/cytidine kinase; Psort location: Cytoplasmic, score: 9.97.
    
 0.932
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.930
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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