Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02588Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (163 aa)    
Predicted Functional Partners:
D920_02587
Oxidoreductase, NAD-binding domain protein; KEGG: efc:EFAU004_01129 9.4e-133 oxidoreductase family, NAD-binding Rossmann fold protein; Psort location: Cytoplasmic, score: 7.50.
       0.991
D920_02586
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.990
D920_02585
KEGG: efc:EFAU004_01127 3.8e-97 serine-type D-Ala-D-Ala carboxypeptidase; Psort location: CytoplasmicMembrane, score: 7.60.
 
     0.977
D920_01439
KEGG: eci:UTI89_C3737 9.6e-05 zntR; zinc-responsive transcriptional regulator K13638; Psort location: Cytoplasmic, score: 9.97.
     
 0.971
D920_02584
Exo-glucosaminidase LytG family protein; KEGG: efc:EFAU004_01126 2.3e-81 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 8.42.
       0.968
pgk
Phosphoglycerate kinase; KEGG: ehr:EHR_08395 9.0e-199 pgk; phosphoglycerate kinase; Psort location: Cytoplasmic, score: 9.97.
       0.967
D920_01438
KEGG: efc:EFAU004_00692 4.7e-234 glnA; glutamine synthetase, type I K01915; Psort location: Cytoplasmic, score: 9.97.
       0.967
D920_02589
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.963
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
 
     0.954
D920_02446
Peroxide operon regulator; KEGG: apb:SAR116_1155 2.4e-15 ferric uptake regulation protein K03711; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.
       0.952
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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