Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_02590SPFH/Band 7/PHB domain protein; KEGG: ctu:CTU_13460 8.8e-14 tolA; cell envelope integrity inner membrane protein TolA K03646; Psort location: CytoplasmicMembrane, score: 8.78. (501 aa)    
Predicted Functional Partners:
D920_02591
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.999
D920_01787
KEGG: sgg:SGGBAA2069_c11630 5.7e-87 putative ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.988
D920_01101
KEGG: efi:OG1RF_10140 3.9e-150 adh3; putative alcohol dehydrogenase (NADP(+)); Psort location: Cytoplasmic, score: 9.97.
       0.960
smc
Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
  
 0.951
D920_00682
Putative cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
 0.946
D920_02774
Putative cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
 0.946
D920_02352
Hypothetical protein; Belongs to the UPF0145 family.
       0.942
D920_00915
SPFH/Band 7/PHB domain protein; KEGG: bbk:BARBAKC583_0924 1.5e-06 hflK; HflK protein; K04088 membrane protease subunit HflK; Psort location: CytoplasmicMembrane, score: 9.55.
  
 0.932
D920_03088
Toxic anion resistance protein TelA; KEGG: pgu:PGUG_00649 5.1e-06 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 7.50; Belongs to the TelA family.
  
  
 0.930
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
     
 0.916
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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