Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
D920_02599Ornithine cyclodeaminase/mu-crystallin family protein; KEGG: efu:HMPREF0351_12084 1.9e-102 ornithine cyclodeaminase K01750; Psort location: Cytoplasmic, score: 7.50. (356 aa)    
Predicted Functional Partners:
D920_02597
KEGG: efc:EFAU004_02089 1.8e-99 phenazine biosynthesis protein PhzF family protein K06998; Psort location: Cytoplasmic, score: 7.50.
 
    0.997
D920_02448
Cysteine synthase A; KEGG: efc:EFAU004_01006 6.6e-132 cysteine synthase A K01738; Psort location: Cytoplasmic, score: 7.50; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.994
D920_00901
KEGG: efu:HMPREF0351_10204 0. aad; aldehyde-alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.970
D920_03104
KEGG: efc:EFAU004_00496 3.4e-135 FAD dependent oxidoreductase.
  
  
 0.969
D920_02598
Transcriptional regulator, GntR family; KEGG: bya:BANAU_0474 6.6e-61 ydeF; Serine hydroxymethyltransferase Serine methylase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.962
D920_02472
KEGG: efu:HMPREF0351_11294 8.3e-173 ilvE; branched-chain-amino-acid transaminase K00826; Psort location: Cytoplasmic, score: 7.50.
     
 0.956
D920_00789
Transporter, major facilitator family protein; KEGG: ssr:SALIVB_1450 3.2e-116 coaE; Dephospho-CoA kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.946
D920_03068
Transporter, major facilitator family protein; KEGG: ssr:SALIVB_1450 8.0e-88 coaE; Dephospho-CoA kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.946
D920_02660
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
     
 0.939
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
       0.921
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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