Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (300 aa)    
Predicted Functional Partners:
D920_02237
Hypothetical protein; KEGG: nth:Nther_2685 1.7e-23 monosaccharide-transporting ATPase K10439.
 
  
 0.999
D920_02238
Branched-chain amino acid ABC transporter, permease protein; KEGG: dac:Daci_4580 3.2e-52 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.999
D920_02239
KEGG: ccb:Clocel_2598 2.9e-154 ABC transporter; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
 0.999
D920_02766
Inosine-uridine preferring nucleoside hydrolase; KEGG: efu:HMPREF0351_12060 3.3e-130 rihB; purine nucleosidase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.998
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.996
D920_03090
Putative glucose uptake protein GlcU; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.995
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.992
D920_01610
Putative HTH-type transcriptional regulator DegA; KEGG: hor:Hore_04570 4.8e-42 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.97.
  
 0.991
D920_00901
KEGG: efu:HMPREF0351_10204 0. aad; aldehyde-alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.988
D920_00062
Hypothetical protein; KEGG: dda:Dd703_0763 1.9e-10 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.984
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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