Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arcAArginine deiminase; KEGG: efc:EFAU004_01736 7.9e-200 arcA; arginine deiminase K01478; Psort location: Cytoplasmic, score: 7.50. (409 aa)    
Predicted Functional Partners:
D920_02659
Carbamate kinase; KEGG: ehr:EHR_10230 1.5e-150 putative amino acid kinase; Psort location: Cytoplasmic, score: 7.50; Belongs to the carbamate kinase family.
 
  
 0.999
D920_02660
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.999
D920_00487
Putative arginine/ornithine antiporter; KEGG: eci:UTI89_C0120 8.7e-19 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.998
D920_02663
Cyclic nucleotide-binding domain protein; KEGG: fma:FMG_1494 3.8e-10 pyruvate-formate-lyase-activating enzyme; K04069 pyruvate formate lyase activating enzyme; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.995
D920_02805
C4-dicarboxylate anaerobic carrier; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.974
D920_01278
KEGG: efc:EFAU004_01339 6.5e-54 GNAT family acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.960
argR
Arginine repressor; Regulates arginine biosynthesis genes.
     
 0.959
D920_03005
C4-dicarboxylate anaerobic carrier; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.959
argS
arginine--tRNA ligase; KEGG: efu:HMPREF0351_11691 3.5e-277 argS; arginine--tRNA ligase K01887; Psort location: Cytoplasmic, score: 9.97.
     
 0.956
pyrB
KEGG: efc:EFAU004_00969 9.8e-154 pyrB; aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.943
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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