Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02663Cyclic nucleotide-binding domain protein; KEGG: fma:FMG_1494 3.8e-10 pyruvate-formate-lyase-activating enzyme; K04069 pyruvate formate lyase activating enzyme; Psort location: Cytoplasmic, score: 7.50. (232 aa)    
Predicted Functional Partners:
arcA
Arginine deiminase; KEGG: efc:EFAU004_01736 7.9e-200 arcA; arginine deiminase K01478; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.995
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.992
D920_02805
C4-dicarboxylate anaerobic carrier; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.991
D920_02659
Carbamate kinase; KEGG: ehr:EHR_10230 1.5e-150 putative amino acid kinase; Psort location: Cytoplasmic, score: 7.50; Belongs to the carbamate kinase family.
 
   
 0.990
D920_02660
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
   
 0.989
argR
Arginine repressor; Regulates arginine biosynthesis genes.
 
  
 0.984
D920_00487
Putative arginine/ornithine antiporter; KEGG: eci:UTI89_C0120 8.7e-19 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.979
D920_01008
Channel protein, MIP family; KEGG: hiq:CGSHiGG_06740 1.7e-23 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.973
D920_03105
Channel protein, MIP family; KEGG: hiq:CGSHiGG_06740 2.8e-30 glpQ; glycerophosphodiester phosphodiesterase K02440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.973
D920_01593
Copper-exporting ATPase; KEGG: efa:EF0298 0. copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.966
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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