Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_02670UDP-glucose 4-epimerase; KEGG: efu:HMPREF0351_11702 6.9e-153 galE3; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 7.50; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (332 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.999
D920_02668
KEGG: ate:Athe_0402 9.4e-30 LacI family transcriptional regulator K02529; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.999
galT
UTP--hexose-1-phosphate uridylyltransferase; KEGG: efu:HMPREF0351_11701 3.8e-223 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.999
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.997
D920_02666
KEGG: efc:EFAU004_01740 2.2e-60 ribosomal-protein-alanine acetyltransferase K03789; Psort location: Cytoplasmic, score: 9.97; overlaps another CDS with the same product name.
     
 0.995
D920_02667
Universal bacterial protein YeaZ; KEGG: efu:HMPREF0351_11699 4.0e-93 M22 family O-sialoglycoprotein endopeptidase; Psort location: Cytoplasmic, score: 7.50.
       0.995
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
  
 0.994
D920_02665
KEGG: efu:HMPREF0351_11697 1.0e-48 rimI; ribosomal-protein-alanine acetyltransferase K03789; Psort location: Cytoplasmic, score: 9.97; overlaps another CDS with the same product name.
     
 0.994
D920_02671
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
       0.993
D920_00719
Phosphoglucomutase; KEGG: efc:EFAU004_02002 3.6e-259 phosphoglucomutase/phosphomannomutase family protein K01835; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.992
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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