Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_02678Peptidase, S54 family; KEGG: efc:EFAU004_01751 1.8e-83 peptidase, S54 family protein; Psort location: CytoplasmicMembrane, score: 10.00. (232 aa)    
Predicted Functional Partners:
D920_02677
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.999
D920_02679
KEGG: efu:HMPREF0351_11710 3.8e-49 fthC; 5-formyltetrahydrofolate cyclo-ligase K01934; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.999
D920_02675
Rhodanese-like protein; KEGG: efu:HMPREF0351_11706 1.0e-48 rhodanese family protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.998
D920_02676
Putative glucokinase; KEGG: efu:HMPREF0351_11707 3.1e-157 glcK; glucokinase K00845; Psort location: Cytoplasmic, score: 9.97.
     
 0.997
D920_02682
Ferrichrome ABC transporter, ATP-binding protein FhuC; KEGG: efu:HMPREF0351_11713 2.5e-107 feuC; iron (Fe3+) ABC superfamily ATP binding cassette transporter, ABC protein K02013; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.995
D920_02680
KEGG: bst:GYO_3639 2.2e-60 ferrichrome transport system permease FhuG K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.992
D920_01804
Hydrolase, alpha/beta domain protein; KEGG: cbj:H04402_00528 9.0e-57 lysophospholipase; Psort location: CytoplasmicMembrane, score: 8.16.
     
 0.991
rph
tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
       0.984
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
    0.982
D920_02681
Putative iron(3+)-hydroxamate import system permease protein FhuB; KEGG: bst:GYO_3640 4.9e-65 ferrichrome transport system permease FhuB K02015; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.981
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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