Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02877Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (131 aa)    
Predicted Functional Partners:
D920_02878
Hypothetical protein; KEGG: efc:EFAU004_01162 3.4e-89 putative lipase/esterase K06889; Psort location: Cytoplasmic, score: 7.50.
       0.997
D920_02466
KEGG: efc:EFAU004_01021 3.7e-122 x-Pro dipeptidyl-peptidase K06889; Psort location: CytoplasmicMembrane, score: 9.55.
       0.767
D920_02854
LPXTG-motif protein cell wall anchor domain protein; KEGG: efc:EFAU004_01021 2.9e-29 x-Pro dipeptidyl-peptidase K06889; Psort location: Cellwall, score: 9.98.
       0.767
D920_02876
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.766
D920_01885
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.709
D920_02879
Hypothetical protein.
       0.697
D920_02880
Zinc-binding alcohol dehydrogenase family protein; KEGG: efu:HMPREF0351_12637 8.1e-111 NADPH:quinone reductase related Zn-dependent oxidoreductase; Psort location: Cytoplasmic, score: 9.67; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
       0.664
D920_02875
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.549
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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