Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02895LPXTG-motif protein cell wall anchor domain protein; KEGG: efu:HMPREF0351_10547 0. fms12; LPXTG family cell surface protein Fms12. (1074 aa)    
Predicted Functional Partners:
D920_00217
Peptidase, M23 family; KEGG: efu:HMPREF0351_12843 1.6e-185 lysozyme; Psort location: CytoplasmicMembrane, score: 9.55.
 
   
 0.973
D920_02190
Rhamnogalacturonan acetylesterase RhgT family protein; KEGG: efc:EFAU004_02549 8.6e-52 GDSL-like Lipase/Acylhydrolase.
 
 
 0.966
D920_02175
Pectinesterase; KEGG: efc:EFAU004_02536 2.8e-94 pectinesterase K01051; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.955
D920_01304
O-antigen polymerase; KEGG: efc:EFAU004_01377 6.0e-22 O-Antigen polymerase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.934
D920_01294
N-acetylmuramoyl-L-alanine amidase; KEGG: llt:CVCAS_0201 8.7e-67 yccB; glycoside hydrolase family protein.
   
 
 0.933
D920_01583
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: llt:CVCAS_0201 3.3e-50 yccB; glycoside hydrolase family protein; Psort location: Extracellular, score: 9.73.
   
 
 0.933
D920_00307
Phage tail component protein.
  
   0.929
D920_02838
GDSL-like protein; KEGG: efc:EFAU004_01190 5.5e-121 GDSL-like lipase/acylhydrolase; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
 0.918
D920_02179
ABC transporter, solute-binding protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.907
D920_02176
Hypothetical protein; KEGG: efc:EFAU004_02537 4.6e-108 alpha/beta hydrolase family protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.905
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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