Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_02970HAMP domain protein; KEGG: efu:HMPREF0351_11586 5.7e-87 sensor histidine kinase; K07718 two-component system, sensor histidine kinase YesM; Psort location: CytoplasmicMembrane, score: 9.81. (566 aa)    
Predicted Functional Partners:
D920_02971
KEGG: ppo:PPM_0270 2.8e-53 yesN1; chemotaxis response regulator protein-glutamate methylesterase K07720; Psort location: Cytoplasmic, score: 9.97.
  
 0.999
D920_02972
Putative lactose-binding protein; KEGG: snc:HMPREF0837_10106 2.0e-06 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: CytoplasmicMembrane, score: 9.68.
 
  
 0.995
D920_02237
Hypothetical protein; KEGG: nth:Nther_2685 1.7e-23 monosaccharide-transporting ATPase K10439.
  
 
 0.987
D920_02162
KEGG: ppo:PPM_0553 7.3e-39 araC7; chemotaxis response regulator protein-glutamate methylesterase 3 K07720; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.984
D920_02160
Hypothetical protein; KEGG: dru:Desru_1808 0.0060 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.965
D920_01425
LytTr DNA-binding domain protein; KEGG: ppo:PPM_2376 1.9e-15 lytTr; chemotaxis response regulator protein-glutamate methylesterase 1; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.940
D920_02581
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 7.6e-06 ycjN; ABC transporter periplasmic binding protein ycjN K02027; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.940
D920_02159
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 2.4e-05 maltose/maltodextrin ABC transporter ATP-binding protein K10108.
 
   
 0.935
D920_00859
LytTr DNA-binding domain protein; KEGG: ppo:PPM_2376 2.1e-18 lytTr; chemotaxis response regulator protein-glutamate methylesterase 1; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.913
D920_02239
KEGG: ccb:Clocel_2598 2.9e-154 ABC transporter; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.913
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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