Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_02980Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (194 aa)    
Predicted Functional Partners:
D920_02981
Pyridine nucleotide-disulfide oxidoreductase; KEGG: efc:EFAU004_02225 2.7e-144 ferredoxin--NADP reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.996
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.995
D920_02982
KEGG: efu:HMPREF0351_12209 2.7e-71 pgpA; phosphatidylglycerophosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.994
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.989
D920_00465
Nucleoside diphosphate kinase; KEGG: efu:HMPREF0351_10641 1.6e-50 ndk; nucleoside-diphosphate kinase K00940; Psort location: Cytoplasmic, score: 9.97; Belongs to the NDK family.
  
 0.987
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 0.981
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
  
 
 0.980
D920_01342
DEAD/DEAH box helicase; KEGG: thl:TEH_16770 6.6e-109 putative RNA helicase; Psort location: Cytoplasmic, score: 9.97.
 
 0.979
cshB
DEAD-box ATP-dependent RNA helicase CshB; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.
 
 0.979
cshA
DEAD-box ATP-dependent RNA helicase CshA; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.
 
 0.978
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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